Research > Software > IO Plugins

LONI Java Image I/O Plugins

Decoders and encoders written in Java for the AFNI, ANALYZE, DICOM, ECAT, GE, MINC, NIFTI and other neuroimaging file formats.

Features

  • Uses Java Image I/O interfaces to read and write metadata and image data
  • Read and write AFNI, ANALYZE 7.5, DICOM, ECAT 7.2, GE 5.0, INTERFILE (including hrrt), MINC, NIFTI, and UCLA PACS file formats
  • All source code is provided; usage examples are included
  • Reads images that are optimized for viewing in the LONI JViewBox toolkit
  • Plugins work with the LONI Debabeler to translate between different file formats

Description

Programmers who develop neuroimaging software applications frequently encounter the need to read/write data from/to different file formats. The LONI Java Image I/O plug-ins give Java programmers easy access to the metadata and image data stored in many common file formats (AFNI, ANALYZE, DICOM, ECAT, GE, INTERFILE, MINC, and NIFTI) produced by scanners and neuroimaging software. Following the Java Image I/O API Specification, all metadata is represented as XML DOM trees and all images are returned using the same standard class. Requires Java 1.4.2 or higher.

Usage

System Requirements

  • Processor: any
  • Other: Java 1.4.2 or higher

Installation

All plugins come pre-compiled and are ready to use.

Purpose